STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22210.1KEGG: ppr:PBPRA0176 hypothetical protein; SPTR: Putative uncharacterized protein DR0488. (145 aa)    
Predicted Functional Partners:
ADR20274.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: gfo:GFO_2644 two-component response transcriptional regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Two-component system response regulator containing LytTR DNA-binding domain; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
  
     0.506
ADR21291.1
Transcriptional regulator, AraC family; COGs: COG5616 integral membrane protein; InterProIPR018060: IPR013026: IPR000005: IPR020449: IPR 018062: IPR005829: IPR019734; KEGG: rbi:RB2501_05325 serine/threonine kinase; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Probable serine/threonine kinase; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
     0.491
ADR22057.1
ATP-cone domain protein; InterPro IPR005144: IPR007560; KEGG: zpr:ZPR_3407 putative nuclease; PFAM: ATP-cone domain protein; restriction endonuclease; SPTR: Putative uncharacterized protein; PFAM: ATP cone domain; Restriction endonuclease.
  
     0.448
ADR22211.1
KEGG: fjo:Fjoh_1372 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.420
ADR23361.1
KEGG: msv:Mesil_3075 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.416
ADR22212.1
KEGG: amr:AM1_2252 hypothetical protein; SPTR: Fumarate hydratase.
       0.406
ADR22213.1
Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056: IPR006175; KEGG: chu:CHU_3374 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Putative uncharacterized protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative.
       0.406
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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