STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22253.1COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR000014: IPR005467: IPR000700: IPR004358: IPR 013655: IPR013767: IPR003661: IPR003594: IPR001610: IPR003018; KEGG: geo:Geob_3565 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; GAF domain protein; SPTR: Multi [...] (1822 aa)    
Predicted Functional Partners:
ADR20832.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 008207: IPR001610: IPR003661: IPR003594: IPR013767: IPR004358; KEGG: chu:CHU_2784 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Multi-sensor hybrid histid [...]
 
 
0.955
ADR22251.1
Putative PAS/PAC sensor protein; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR000014: IPR001789; KEGG: zpr:ZPR_1259 PAS/PAC sensor signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; PAS domain containing protein; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 0.939
ADR22252.1
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: nde:NIDE1492 CheY-like response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator; PFAM: Response regulator receiver domain.
 
 
 0.931
ADR20406.1
PAS/PAC sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014: IPR004358: IPR013655: IPR013767: IPR 003661: IPR003594: IPR001789: IPR001610: IPR005467: IPR000700; KEGG: zpr:ZPR_2293 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat- [...]
 
 
0.929
ADR22250.1
Response regulator receiver; InterPro IPR001789; KEGG: lbl:LBL_0269 receiver protein of a two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Receiver protein of a two-component response regulator; PFAM: Response regulator receiver domain.
 
 
 0.895
ADR20412.1
Response regulator receiver protein; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: nfa:nfa1540 putative two-component system response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator; PFAM: Response regulator receiver domain.
 
 
 0.891
ADR20047.1
Putative PAS/PAC sensor protein; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR000014; KEGG: zpr:ZPR_1259 PAS/PAC sensor signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; PAS domain containing protein; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; TIGRFAM: PAS domain S-box.
 
 
 0.890
ADR22296.1
Response regulator receiver protein; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: rba:RB11201 response regulator rcp1; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator rcp1; PFAM: Response regulator receiver domain.
 
 
 0.890
ADR20533.1
COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789; KEGG: hoh:Hoch_4644 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain.
 
 
 0.889
ADR23158.1
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: nfa:nfa1540 putative two-component system response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Putative two-component system response regulator; PFAM: Response regulator receiver domain.
 
 
 0.822
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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