STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22285.1Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: cat:CA2559_03805 hypothetical protein; PFAM: surface antigen (D15); SPTR: Putative uncharacterized protein; PFAM: Surface antigen. (769 aa)    
Predicted Functional Partners:
ADR22286.1
Protein of unknown function DUF490; InterPro IPR007452; KEGG: zpr:ZPR_2082 hypothetical protein; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF490).
 
   
 0.954
ADR20561.1
KEGG: cat:CA2559_09178 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.643
fabZ
3-hydroxyacyl-(acyl-carrier-protein) dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
  
 0.555
ADR23246.1
InterPro IPR001623; KEGG: gfo:GFO_1973 DnaJ-like protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: DnaJ-like protein; PFAM: DnaJ domain.
  
 
  0.529
ADR22848.1
Site-2 protease; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478: IPR008915: IPR004387; KEGG: dfe:Dfer_4131 membrane-associated zinc metalloprotease; PFAM: peptidase M50; SPTR: Membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP.
  
  
 0.526
ADR22284.1
NAD(P)H quinone oxidoreductase, PIG3 family; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR014189: IPR013154: IPR013149; KEGG: ote:Oter_0170 PIG3 family NAD(P)H quinone oxidoreductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: NAD(P)H quinone oxidoreductase, PIG3 family; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family.
  
   0.487
ADR22314.1
KEGG: bvu:BVU_3214 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 
 0.477
ADR20333.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440: IPR019734: IPR006597: IPR013026; KEGG: chu:CHU_1538 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
  
 
 0.471
ADR20971.1
Outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: sli:Slin_1307 outer membrane assembly lipoprotein YfiO; SPTR: Outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO.
 
 
 0.471
ADR23762.1
InterPro IPR018580; KEGG: bfs:BF4264 hypothetical protein; PFAM: Protein of unknown function, membrane YfhO; SPTR: Putative uncharacterized protein; PFAM: Bacterial membrane protein YfhO.
  
     0.456
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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