STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22338.1KEGG: chu:CHU_1870 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (131 aa)    
Predicted Functional Partners:
ADR22339.1
Methyltransferase type 11; InterPro IPR013216; KEGG: chu:CHU_1869 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain.
       0.789
ADR22340.1
KEGG: cpi:Cpin_4430 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (COG2071).
       0.789
ADR22341.1
KEGG: chu:CHU_1867 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.789
ADR22337.1
Redoxin domain protein; COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR017936: IPR013740; KEGG: gfo:GFO_0928 thiol-disulfide oxidoreductase; PFAM: Redoxin domain protein; SPTR: Thiol-disulfide oxidoreductase; PFAM: Redoxin.
       0.543
ADR22342.1
COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: cts:Ctha_1342 nucleic acid-binding protein contains PIN domain-like protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF3368).
       0.535
ADR22343.1
KEGG: cch:Cag_0312 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0175).
       0.535
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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