STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22342.1COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: cts:Ctha_1342 nucleic acid-binding protein contains PIN domain-like protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF3368). (166 aa)    
Predicted Functional Partners:
ADR22343.1
KEGG: cch:Cag_0312 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0175).
 
     0.949
ADR21958.1
Protein of unknown function DUF433; COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: rmr:Rmar_1887 protein of unknown function DUF433; PFAM: protein of unknown function DUF433; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF433).
  
     0.752
ADR21959.1
KEGG: sli:Slin_1155 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.637
ADR22925.1
KEGG: lbf:LBF_2813 PIN domain-containing protein; SPTR: Putative PIN domain protein; PFAM: PIN domain.
  
     0.620
ADR20020.1
COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: tde:TDE0599 PilT domain-containing protein; PFAM: PilT protein domain protein; SPTR: PIN domain protein; PFAM: PIN domain.
  
     0.597
ADR20578.1
COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: sli:Slin_4014 PilT protein domain protein; PFAM: PilT protein domain protein; SPTR: Putative uncharacterized protein; PFAM: PIN domain.
  
     0.571
ADR22338.1
KEGG: chu:CHU_1870 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.535
ADR22339.1
Methyltransferase type 11; InterPro IPR013216; KEGG: chu:CHU_1869 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain.
       0.535
ADR22340.1
KEGG: cpi:Cpin_4430 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (COG2071).
       0.535
ADR22341.1
KEGG: chu:CHU_1867 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.535
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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