STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22353.1KEGG: chu:CHU_3505 hypothetical protein; SPTR: Tetratricopeptide repeat domain protein. (603 aa)    
Predicted Functional Partners:
ADR22359.1
Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: dfe:Dfer_3800 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
   
 0.835
ADR20808.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR011659: IPR006664; KEGG: chu:CHU_2993 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Possible outer membrane protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
  
 0.815
ADR22987.1
InterPro IPR011933; KEGG: sli:Slin_1217 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
 
     0.778
ADR21891.1
KEGG: dfe:Dfer_2587 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.775
ADR22580.1
KEGG: chu:CHU_3275 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.770
ADR23632.1
KEGG: chu:CHU_1740 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
ADR23296.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterProIPR011659: IPR006665: IPR006664: IPR013026: IPR 019734; KEGG: sli:Slin_5203 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
  
 0.769
ADR22878.1
KEGG: dfe:Dfer_0450 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
ADR22537.1
Gliding motility associated protein GldN; InterPro IPR019847; KEGG: aas:Aasi_1512 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility associated protien GldN; TIGRFAM: gliding motility associated protien GldN.
  
     0.739
ADR23611.1
Hypothetical protein; InterPro IPR019734: IPR013026; KEGG: aas:Aasi_0523 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Receptor family ligand binding region.
  
     0.732
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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