STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22359.1Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: dfe:Dfer_3800 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (1133 aa)    
Predicted Functional Partners:
ADR22353.1
KEGG: chu:CHU_3505 hypothetical protein; SPTR: Tetratricopeptide repeat domain protein.
 
   
 0.835
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
     
 0.780
ADR22987.1
InterPro IPR011933; KEGG: sli:Slin_1217 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
 
     0.779
ADR21891.1
KEGG: dfe:Dfer_2587 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.775
ADR22878.1
KEGG: dfe:Dfer_0450 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.775
ADR23632.1
KEGG: chu:CHU_1740 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.775
ADR22358.1
ATP-binding region ATPase domain protein; InterPro IPR003594; KEGG: chu:CHU_3500 anti-sigma regulatory factor; PFAM: ATP-binding region ATPase domain protein; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.773
ADR21476.1
Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: dfe:Dfer_4773 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58.
  
     0.760
ADR22580.1
KEGG: chu:CHU_3275 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.743
ADR23303.1
KEGG: dfe:Dfer_3773 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.665
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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