STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22376.1KEGG: sli:Slin_0763 hypothetical protein; SPTR: Lipoprotein, putative. (417 aa)    
Predicted Functional Partners:
ADR22122.1
KEGG: dfe:Dfer_4376 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.644
ADR23441.1
Hypothetical protein; InterPro IPR013026; KEGG: sli:Slin_5122 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide repeat domain protein.
  
     0.603
ADR22377.1
Response regulator receiver; InterPro IPR001789; KEGG: dfe:Dfer_2534 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator; PFAM: Response regulator receiver domain.
       0.594
ADR22375.1
Pyridoxal-5'-phosphate-dependent protein beta subunit; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: dfe:Dfer_2376 pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Putative threonine dehydratase; PFAM: Pyridoxal-phosphate dependent enzyme.
  
    0.551
ADR22583.1
KEGG: dfe:Dfer_4875 hypothetical protein; SPTR: Membrane protein, putative.
  
     0.526
ADR22373.1
KEGG: gfo:GFO_3348 transcription elongation factor; SPTR: Putative uncharacterized protein; PFAM: Transcription elongation factor, GreA/GreB, C-term.
       0.482
ADR22374.1
KEGG: cat:CA2559_06315 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.479
ADR22152.1
PKD domain containing protein; InterPro IPR000601; KEGG: sli:Slin_5463 hypothetical protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Cell surface protein, putative; PFAM: PKD domain.
  
    0.475
ADR22359.1
Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: dfe:Dfer_3800 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.472
ADR21891.1
KEGG: dfe:Dfer_2587 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.461
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.