STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22391.1KEGG: dfe:Dfer_3742 hypothetical protein; SPTR: Tetratricopeptide repeat domain protein. (389 aa)    
Predicted Functional Partners:
ADR22392.1
KEGG: chu:CHU_0064 hypothetical protein; SPTR: Membrane protein, putative.
 
     0.802
ADR20408.1
KEGG: dfe:Dfer_3845 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
ADR21901.1
KEGG: sli:Slin_6329 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
ADR23425.1
Hypothetical protein; InterPro IPR011652; KEGG: dfe:Dfer_3784 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
ADR22583.1
KEGG: dfe:Dfer_4875 hypothetical protein; SPTR: Membrane protein, putative.
  
     0.773
ADR23069.1
KEGG: chu:CHU_2520 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
ADR23441.1
Hypothetical protein; InterPro IPR013026; KEGG: sli:Slin_5122 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide repeat domain protein.
  
     0.770
ADR20472.1
Hypothetical protein; COGs: COG0135 Phosphoribosylanthranilate isomerase; KEGG: dfe:Dfer_2823 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Belongs to the TrpF family.
  
     0.760
ADR20806.1
KEGG: chu:CHU_2804 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.760
ADR20039.1
KEGG: dfe:Dfer_0460 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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