STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22393.1COGs: COG4772 Outer membrane receptor for Fe3+-dicitrate; InterPro IPR012910: IPR000531: IPR010917; KEGG: gfo:GFO_2512 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent outer membrane receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (810 aa)    
Predicted Functional Partners:
ADR22395.1
Peptidase M75, Imelysin; InterPro IPR018976; KEGG: cat:CA2559_08516 hypothetical protein; PFAM: Peptidase M75, Imelysin; SPTR: Putative uncharacterized protein; PFAM: Imelysin.
 
     0.949
ADR22396.1
KEGG: fps:FP1486 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.949
ADR22394.1
HTTM domain protein; InterPro IPR011020; KEGG: gfo:GFO_2513 vitamin K-dependent gamma-carboxylase; SMART: HTTM domain protein; SPTR: Gamma-glutamyl carboxylase-like protein; PFAM: Vitamin K-dependent gamma-carboxylase.
 
     0.944
ADR22230.1
Peptidase M75, Imelysin; COGs: COG3489 periplasmic lipoprotein; InterPro IPR018976; KEGG: chu:CHU_0310 hypothetical protein; PFAM: Peptidase M75, Imelysin; SPTR: Putative uncharacterized protein; PFAM: Imelysin.
 
     0.783
ADR22438.1
KEGG: cat:CA2559_08646 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.505
ADR20637.1
KEGG: caa:Caka_0930 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.496
ADR22439.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: dfe:Dfer_4568 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor domain protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
  
 0.453
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.