STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22403.1ABC transporter, permease protein, putative; COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: dfe:Dfer_4966 ABC transporter, permease protein, putative; SPTR: ABC transporter, permease protein, putative. (441 aa)    
Predicted Functional Partners:
ADR22404.1
ABC transporter related protein; COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: dfe:Dfer_4965 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter.
  
 0.962
ADR22405.1
Hypothetical protein; KEGG: dae:Dtox_3786 GAF sensor hybrid histidine kinase; SPTR: PAS.
       0.507
ADR21995.1
KEGG: sli:Slin_1298 hypothetical protein; SPTR: Putative outer membrane protein.
  
     0.491
ADR22402.1
Endonuclease/exonuclease/phosphatase; COGs: COG3021 conserved hypothetical protein; InterPro IPR005135; KEGG: dfe:Dfer_1523 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; manually curated; PFAM: Endonuclease/Exonuclease/phosphatase family.
       0.476
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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