STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22441.1Monooxygenase FAD-binding protein; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR002938: IPR003042; KEGG: sli:Slin_3185 monooxygenase FAD-binding protein; PFAM: monooxygenase FAD-binding; SPTR: FAD dependent oxidoreductase, putative; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (375 aa)    
Predicted Functional Partners:
ADR22218.1
Methyltransferase type 12; InterPro IPR013217; KEGG: gfo:GFO_1611 SAM-dependent methyltransferase; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain.
     0.864
ADR22219.1
Chalcone and stilbene synthase domain protein; COGs: COG3424 naringenin-chalcone synthase; InterPro IPR011141: IPR001099: IPR012328; KEGG: llo:LLO_1607 naringenin-chalcone synthase; PFAM: chalcone and stilbene synthase domain protein; SPTR: Possible chalcone synthase; PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain.
 
  
 0.767
ADR22220.1
InterPro IPR000537; KEGG: dol:Dole_2097 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: Putative uncharacterized protein; PFAM: UbiA prenyltransferase family.
 
  
 0.736
ADR23373.1
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR012255: IPR014730; KEGG: sli:Slin_0713 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein (Beta subunit); PFAM: Electron transfer flavoprotein domain.
  
 
 0.630
ADR22442.1
Membrane protein; COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: chu:CHU_3675 membrane protein; SPTR: Membrane protein, putative; PFAM: MMPL family.
       0.520
ileS
Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
       0.520
lspA
Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.520
ADR23374.1
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR001308: IPR014730: IPR014731; KEGG: chu:CHU_1360 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
  
 
 0.480
ADR23710.1
phospholipase/Carboxylesterase; COGs: COG0400 esterase; InterPro IPR003140; KEGG: sli:Slin_0089 hypothetical protein; PFAM: phospholipase/Carboxylesterase; SPTR: Putative uncharacterized protein; PFAM: Phospholipase/Carboxylesterase.
  
     0.421
ADR23280.1
COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: sli:Slin_0326 Mg-chelatase subunit ChlI-like protein; SPTR: Magnesium chelatase, subunit ChlI family protein; PFAM: Sigma-54 interaction domain.
  
  
 0.409
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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