STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22451.1Protein of unknown function DUF980; COGs: COG3228 conserved hypothetical protein; InterPro IPR010384; KEGG: chu:CHU_1809 hypothetical protein; PFAM: protein of unknown function DUF980; SPTR: Putative uncharacterized protein; PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator; Belongs to the MtfA family. (250 aa)    
Predicted Functional Partners:
ADR22450.1
Abortive infection protein; InterPro IPR003675; KEGG: zpr:ZPR_4397 metal-dependent membrane protease; PFAM: Abortive infection protein; SPTR: Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
       0.752
ADR22452.1
Glycoside hydrolase 15-related protein; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: cpi:Cpin_4023 glycoside hydrolase 15-related; PFAM: glycoside hydrolase 15-related; SPTR: Glycoside hydrolase; PFAM: Glycosyl hydrolases family 15.
       0.588
ADR20936.1
KEGG: cat:CA2559_01750 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Pregnancy-associated plasma protein-A.
 
    0.449
ADR22453.1
Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: phe:Phep_3007 peptidase M28; PFAM: peptidase M28; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M28.
       0.446
ADR20632.1
KEGG: dfe:Dfer_2025 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Uncharacterised protein family (UPF0104).
 
     0.427
ADR22519.1
Methyltransferase type 11; InterPro IPR013216; KEGG: cpi:Cpin_4275 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Membrane-associated protein, putative; PFAM: Methyltransferase domain.
  
     0.411
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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