STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22458.1Peptidase M28; InterPro IPR007484; KEGG: sli:Slin_5551 peptidase M28; PFAM: peptidase M28; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M28. (330 aa)    
Predicted Functional Partners:
ADR22496.1
KEGG: sli:Slin_4892 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.600
ADR20472.1
Hypothetical protein; COGs: COG0135 Phosphoribosylanthranilate isomerase; KEGG: dfe:Dfer_2823 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Belongs to the TrpF family.
  
     0.587
ADR22025.1
Hypothetical protein; COGs: COG2971 N-acetylglucosamine kinase; KEGG: dfe:Dfer_3564 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: BadF/BadG/BcrA/BcrD ATPase family.
  
     0.575
ADR20920.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: zpr:ZPR_4657 putative dehydrogenase; PFAM: oxidoreductase domain protein; SPTR: Putative dehydrogenase; manually curated; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
  
  
  0.486
ADR21993.1
Protein of unknown function DUF1239; InterPro IPR010664; KEGG: chu:CHU_3270 hypothetical protein; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1239).
  
     0.482
ADR22534.1
Gliding motility-associated lipoprotein GldK; COGs: COG1262 conserved hypothetical protein; InterPro IPR019867: IPR005532; KEGG: chu:CHU_0171 gliding motility-related protein; PFAM: protein of unknown function DUF323; SPTR: Gliding motility-related protein; TIGRFAM: gliding motility-associated lipoprotein GldK; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldK.
  
     0.468
ADR20069.1
Smr protein/MutS2; InterPro IPR002625; KEGG: dfe:Dfer_2585 Smr protein/MutS2; PFAM: Smr protein/MutS2; SPTR: Putative uncharacterized protein; PFAM: Smr domain.
  
     0.462
ADR23685.1
Protein of unknown function DUF1599; InterPro IPR011630; KEGG: chu:CHU_3224 hypothetical protein; PFAM: protein of unknown function DUF1599; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1599).
  
     0.441
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
     0.431
ADR22029.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018062: IPR018060: IPR000005; KEGG: chu:CHU_3826 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
     0.418
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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