STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22464.1InterPro IPR002541; KEGG: sli:Slin_1447 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Heme exporter protein C, putative; PFAM: Cytochrome C assembly protein. (221 aa)    
Predicted Functional Partners:
ADR22465.1
COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003544; KEGG: dfe:Dfer_5084 cytochrome c-type biogenesis protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; SPTR: Cytochrome c-type biogenesis protein CcmB; PFAM: CcmB protein.
 
 0.997
ADR22462.1
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
 
 0.986
ADR22461.1
COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541: IPR003567; KEGG: dfe:Dfer_5080 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c biogenesis factor; PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF.
 
  
 0.928
ADR22463.1
KEGG: sli:Slin_1446 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.879
ADR21729.1
WD40-like beta Propeller containing protein; InterPro IPR011659; KEGG: chu:CHU_3233 WD-40-like repeat-containing protein; PFAM: WD40-like beta Propeller containing protein; SPTR: Putative uncharacterized protein; PFAM: WD40-like Beta Propeller Repeat.
 
     0.637
ADR23372.1
KEGG: sli:Slin_0714 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.624
ADR22460.1
Domain of unknown function DUF2520; COGs: COG5495 conserved hypothetical protein; InterPro IPR018931; KEGG: sli:Slin_6619 hypothetical protein; PFAM: Domain of unknown function DUF2520; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2520); Rossmann-like domain.
       0.617
ADR21827.1
KEGG: chu:CHU_0707 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.584
ADR23501.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: phe:Phep_4277 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter.
  
    0.569
ADR22571.1
Tetratricopeptide domain protein; InterPro IPR019734: IPR013026; KEGG: dfe:Dfer_4434 tetratricopeptide domain protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
  
     0.562
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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