STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22494.1DinB family protein; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: cpi:Cpin_6952 DinB family protein; PFAM: DinB family protein; SPTR: Nuclease inhibitor; PFAM: DinB family. (161 aa)    
Predicted Functional Partners:
ADR22493.1
Protein of unknown function DUF2490; InterPro IPR019619; KEGG: gfo:GFO_3452 hypothetical protein; PFAM: Protein of unknown function DUF2490; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2490).
       0.773
ADR22492.1
SMP-30/Gluconolaconase/LRE-like region-containing protein; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: sli:Slin_0076 SMP-30/gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; SPTR: SMP-30/Gluconolaconase/LRE domain protein; manually curated; PFAM: SMP-30/Gluconolaconase/LRE-like region.
  
    0.579
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
       0.503
ADR22496.1
KEGG: sli:Slin_4892 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.503
ADR20121.1
Esterase; COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: sus:Acid_1775 putative esterase; PFAM: esterase; SPTR: Enterochelin esterase; PFAM: Putative esterase.
  
     0.475
ADR22491.1
Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: gfo:GFO_1948 GDSL-like lipase/acylhydrolase; PFAM: lipolytic protein G-D-S-L family; SPTR: GDSL-like lipase/acylhydrolase domain protein; PFAM: GDSL-like Lipase/Acylhydrolase.
       0.424
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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