STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22498.1COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337: IPR006379: IPR001830; KEGG: cpi:Cpin_4022 trehalose-phosphatase; PFAM: glycosyl transferase family 20; trehalose-phosphatase; SPTR: Trehalose-6-phosphate synthase-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB. (723 aa)    
Predicted Functional Partners:
ADR20148.1
Alpha,alpha-trehalase; COGs: COG1626 Neutral trehalase; InterPro IPR001661: IPR018232; KEGG: cja:CJA_0284 trehalase, putative, tre37A; PFAM: glycoside hydrolase family 37; PRIAM: Alpha,alpha-trehalase; SPTR: Cytoplasmic trehalase; PFAM: Trehalase.
 
 0.979
ADR23544.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0802 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1.
  
 0.926
ADR23546.1
Glycogen(starch) synthase; InterPro IPR008631; KEGG: chu:CHU_1581 glycogen synthase, glycosyltransferase family 3 protein; PFAM: glycogen synthase; PRIAM: Glycogen(starch) synthase; SPTR: Candidate glycogen synthase, Glycosyltransferase Family 3 protein; PFAM: Glycogen synthase.
  
 0.926
ADR22452.1
Glycoside hydrolase 15-related protein; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: cpi:Cpin_4023 glycoside hydrolase 15-related; PFAM: glycoside hydrolase 15-related; SPTR: Glycoside hydrolase; PFAM: Glycosyl hydrolases family 15.
 
   
 0.856
ADR20600.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR008089: IPR001509; KEGG: cff:CFF8240_1396 WbnF; PFAM: NAD-dependent epimerase/dehydratase; SPTR: WbnF; PFAM: NAD dependent epimerase/dehydratase family.
     
  0.800
ADR22643.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: cpc:Cpar_1802 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.
     
  0.800
ADR23652.1
COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395: IPR018170: IPR020471; KEGG: srm:SRM_01456 aldehyde reductase; PFAM: aldo/keto reductase; PRIAM: Aldehyde reductase; SPTR: Aldehyde reductase; PFAM: Aldo/keto reductase family.
   
  
 0.761
ADR23370.1
Hypothetical protein; COGs: COG0655 Multimeric flavodoxin WrbA; KEGG: nwa:Nwat_1668 hypothetical protein; SPTR: Divalent cation-transport integral membrane protein mntH; PFAM: NADPH-dependent FMN reductase.
   
    0.680
ADR23624.1
KEGG: hla:Hlac_1511 hypothetical protein; SPTR: Putative uncharacterized protein.
   
  
 0.675
ADR23575.1
COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394: IPR007046: IPR007634; KEGG: sli:Slin_0631 RNA polymerase, sigma 54 subunit, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; SPTR: RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor.
   
    0.651
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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