STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22530.1Hypothetical protein; KEGG: chu:CHU_0166 outer membrane protein; SPTR: Outer membrane protein, OMP85 family, putative. (552 aa)    
Predicted Functional Partners:
ADR23410.1
EppA_BapA family protein; InterPro IPR009894; KEGG: chu:CHU_1567 hypothetical protein; PFAM: EppA_BapA family protein; SPTR: Putative uncharacterized protein.
  
     0.775
ADR23447.1
KEGG: chu:CHU_2196 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.775
ADR23411.1
KEGG: chu:CHU_1568 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
ADR23297.1
KEGG: dfe:Dfer_1747 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.730
ADR22531.1
KEGG: sli:Slin_3228 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.693
ADR21725.1
Hypothetical protein; InterPro IPR016160; KEGG: chu:CHU_3237 hypothetical protein; SPTR: Fjo24; PFAM: Peptidase family C25.
  
     0.679
ADR21160.1
Hypothetical protein; KEGG: cts:Ctha_0506 helix-hairpin-helix DNA-binding class 1; SPTR: Putative uncharacterized protein.
 
     0.675
ADR21845.1
COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: chu:CHU_0192 peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Putative exported isomerase; PFAM: PPIC-type PPIASE domain.
 
 
 0.659
ADR22121.1
KEGG: cpi:Cpin_0536 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.657
ADR22532.1
COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: chu:CHU_0169 uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: Possible uroporphyrinogen-III synthase; manually curated; PFAM: Uroporphyrinogen-III synthase HemD.
  
    0.656
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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