STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22539.1Peptidoglycan glycosyltransferase; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264: IPR001460; KEGG: aas:Aasi_0981 hypothetical protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 1A; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase. (760 aa)    
Predicted Functional Partners:
ADR20393.1
Penicillin-binding protein 1C; COGs: COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; InterPro IPR011815: IPR001264: IPR001460: IPR009647; KEGG: fps:FP2234 membrane carboxypeptidase/penicillin-binding protein PbpC; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: penicillin-binding protein 1C; PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; T [...]
  
  
0.921
ADR20202.1
Peptidoglycan glycosyltransferase; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264: IPR001460; KEGG: zpr:ZPR_2556 bifunctional transglycosylase/transpeptidase penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Bifunctional transglycosylase/transpeptidase penicillin-binding protein; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase.
  
  
 
0.911
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.776
ADR23262.1
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311: IPR001460: IPR005543; KEGG: chu:CHU_2746 cell division protein, penicillin-binding protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; PRIAM: Peptidoglycan glycosyltransferase; SMART: PASTA domain containing protein; SPTR: Cell division protein, penicillin-binding protein; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; P [...]
  
 
 
 0.761
ADR22541.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: aas:Aasi_0690 hypothetical protein; PFAM: Peptidase M23; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M23.
 
   
 0.743
ADR22232.1
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR017790: IPR005311: IPR001460; KEGG: aas:Aasi_0246 hypothetical protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 2 (PBP-2); TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.
  
 
 
 0.709
ADR22231.1
Rod shape-determining protein RodA; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR011923: IPR001182: IPR018365; KEGG: chu:CHU_3304 rod shape-determining protein; PFAM: cell cycle protein; SPTR: Rod shape-determining protein; TIGRFAM: rod shape-determining protein RodA; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; Belongs to the SEDS family.
  
   
 0.702
ADR22540.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR003107: IPR013026: IPR001440; KEGG: chu:CHU_0177 TPR repeat-containing gliding mobility protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Gliding motility-related protein; TPR repeat-containing protein.
       0.653
ADR23266.1
Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: aas:Aasi_0815 hypothetical protein; PFAM: cell cycle protein; SPTR: Putative transmembrane rod-shape determining protein; PFAM: Cell cycle protein; Belongs to the SEDS family.
  
   
 0.651
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
     0.643
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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