STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22542.1Protein of unknown function DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: aas:Aasi_0691 hypothetical protein; PFAM: protein of unknown function DUF583; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF583. (146 aa)    
Predicted Functional Partners:
ADR22541.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: aas:Aasi_0690 hypothetical protein; PFAM: Peptidase M23; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M23.
 
   
 0.903
ADR22543.1
KEGG: cat:CA2559_03030 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.789
ADR22544.1
KEGG: gfo:GFO_3271 membrane protein; SPTR: Putative uncharacterized protein.
       0.786
ADR22886.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: aas:Aasi_1633 hypothetical protein; PFAM: Peptidase M23; SPTR: M23/M37 peptidase; PFAM: Peptidase family M23.
 
   
 0.688
atpB
ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
       0.575
ADR21846.1
KEGG: aas:Aasi_0784 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.549
ADR22540.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR003107: IPR013026: IPR001440; KEGG: chu:CHU_0177 TPR repeat-containing gliding mobility protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Gliding motility-related protein; TPR repeat-containing protein.
       0.548
ADR22539.1
Peptidoglycan glycosyltransferase; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264: IPR001460; KEGG: aas:Aasi_0981 hypothetical protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 1A; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase.
 
   
 0.526
ADR22546.1
ATP synthase F0 subcomplex C subunit; InterPro IPR002379: IPR000454: IPR020537; KEGG: fjo:Fjoh_1056 H+-transporting two-sector ATPase, C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: Putative uncharacterized protein; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c.
       0.495
ADR21916.1
KEGG: aas:Aasi_0797 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.472
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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