STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22569.1A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. (348 aa)    
Predicted Functional Partners:
ADR23499.1
NUDIX hydrolase; InterPro IPR000086; KEGG: dfe:Dfer_5005 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain.
    
 0.844
ADR22360.1
COGs: COG0708 Exonuclease III; InterProIPR000097: IPR004808: IPR005135: IPR020847: IPR 020848; KEGG: coc:Coch_1451 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: Exodeoxyribonuclease III; SPTR: Exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth).
    
 0.721
ADR22568.1
COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424: IPR011344; KEGG: chu:CHU_3685 single-stranded DNA binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
 
   
 0.675
ADR22567.1
Gliding motility-associated protein GldE; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR019862: IPR002550: IPR005170; KEGG: sli:Slin_5985 gliding motility-associated protein GldE; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SPTR: Hemolysin-related protein, containing CBS domain; TIGRFAM: gliding motility-associated protein GldE; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE.
       0.566
ADR22571.1
Tetratricopeptide domain protein; InterPro IPR019734: IPR013026; KEGG: dfe:Dfer_4434 tetratricopeptide domain protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
   
   0.544
ADR22570.1
COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: chu:CHU_3687 DNA-binding protein HU; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: DNA-binding protein HU; PFAM: Bacterial DNA-binding protein; Belongs to the bacterial histone-like protein family.
       0.523
ADR22529.1
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.520
ADR22130.1
COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR004597: IPR005019; KEGG: zpr:ZPR_4445 DNA-3-methyladenine glycosylase; PFAM: methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: 3-Methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I.
    
 0.496
ADR21415.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 
 0.495
ADR22566.1
Protein of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550; KEGG: dsa:Desal_1538 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; SPTR: Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21.
       0.456
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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