STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22606.1TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: cat:CA2559_01945 putative outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (968 aa)    
Predicted Functional Partners:
ADR22605.1
KEGG: cat:CA2559_01950 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
 
   0.954
ADR22874.1
KEGG: sru:SRU_2860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.576
ADR22864.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: gfo:GFO_2921 SusD/RagB family protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein; PFAM: SusD family.
 
 
   0.517
ADR22607.1
Flavin-containing monooxygenase; COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR020946: IPR000103: IPR013027; KEGG: zpr:ZPR_2618 monooxygenase; PFAM: Flavin-containing monooxygenase-like; SPTR: Monooxygenase; PFAM: Flavin-binding monooxygenase-like; Thi4 family.
       0.459
ADR22604.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594: IPR005467: IPR011622: IPR011623: IPR 004358; KEGG: chu:CHU_2797 sensor kinase of Zn/Pb responsive two-component regulatory system; PFAM: Diverse 7TM receptor transmembrane region; Diverse 7TM receptor extracellular region 2; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Periplasmic Sensor Hybrid Histidine Kinase; PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoaccept [...]
       0.451
ADR23199.1
KEGG: rbi:RB2501_09295 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.441
ADR21278.1
KEGG: cat:CA2559_04170 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.430
ADR20989.1
KEGG: cpi:Cpin_0370 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.422
ADR22931.1
Peptidase M14 carboxypeptidase A; InterPro IPR000834; KEGG: gfo:GFO_2233 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain, putative; PFAM: Zinc carboxypeptidase.
  
     0.413
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.