STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22628.1InterPro IPR001818; KEGG: gfo:GFO_2927 hypothetical protein; PFAM: peptidase M10A and M12B matrixin and adamalysin; SPTR: Putative uncharacterized protein. (814 aa)    
Predicted Functional Partners:
ADR20733.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR018247: IPR012910: IPR000531; KEGG: sru:SRU_0358 outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
     0.590
ADR22864.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: gfo:GFO_2921 SusD/RagB family protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein; PFAM: SusD family.
  
     0.573
ADR21879.1
Peptidase M14 carboxypeptidase A; InterPro IPR000834; KEGG: rbi:RB2501_11282 secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; PFAM: peptidase M14 carboxypeptidase A; SPTR: Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain; PFAM: Zinc carboxypeptidase.
  
     0.483
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
       0.445
ADR22626.1
COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546; KEGG: sli:Slin_5126 H+transporting two-sector ATPase delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; SPTR: ATP synthase epsilon chain; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain.
       0.443
ADR20732.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: srm:SRM_00437 conserved hypothetical protein, outer membrane, containing RagB/SusD domain; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
     0.430
ADR22931.1
Peptidase M14 carboxypeptidase A; InterPro IPR000834; KEGG: gfo:GFO_2233 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain, putative; PFAM: Zinc carboxypeptidase.
  
     0.401
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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