STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22629.1COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594: IPR005467: IPR004358; KEGG: sli:Slin_3618 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (407 aa)    
Predicted Functional Partners:
ADR23506.1
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR013973; KEGG: sli:Slin_3042 response regulator receiver protein; PFAM: PglZ domain protein; response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator; PFAM: PglZ domain; Response regulator receiver domain.
  
 
 
 0.806
ADR20832.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 008207: IPR001610: IPR003661: IPR003594: IPR013767: IPR004358; KEGG: chu:CHU_2784 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Multi-sensor hybrid histid [...]
 
 
 0.790
ADR21724.1
KEGG: chu:CHU_3238 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.769
ADR21761.1
Outer membrane chaperone Skp (OmpH); InterPro IPR005632; KEGG: chu:CHU_3413 OmpH family outer membrane protein; PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein, ompH family; PFAM: Outer membrane protein (OmpH-like).
  
     0.761
ADR23003.1
KEGG: chu:CHU_3167 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3467).
  
 
   0.689
ADR23311.1
KEGG: dfe:Dfer_4465 gliding motility-related protein; SPTR: SprA.
  
  
 0.665
ADR22242.1
PAS sensor protein; InterPro IPR000014; KEGG: azo:azo3685 putative hybrid sensor and regulator protein; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.629
ADR23345.1
Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: chu:CHU_3042 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Response regulator DrrA; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
  
   0.600
ADR21725.1
Hypothetical protein; InterPro IPR016160; KEGG: chu:CHU_3237 hypothetical protein; SPTR: Fjo24; PFAM: Peptidase family C25.
  
   
 0.599
ADR22111.1
KEGG: chu:CHU_0307 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723).
  
    0.596
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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