STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22655.1Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: sli:Slin_6307 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Chain length determinant protein; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family. (790 aa)    
Predicted Functional Partners:
ADR22656.1
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715; KEGG: chu:CHU_3844 polysaccharide export periplasmic protein; PFAM: polysaccharide export protein; SPTR: Periplasmic protein involved in polysaccharide export; manually curated; PFAM: Polysaccharide biosynthesis/export protein.
 
 
 0.995
ADR20606.1
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR019554; KEGG: gfo:GFO_1984 polysaccharide export protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
 
 0.984
ADR20343.1
COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: coc:Coch_0716 sugar transferase; PFAM: sugar transferase; SPTR: Putative galactosyltransferase; PFAM: Bacterial sugar transferase.
 
  
 0.929
ADR22657.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: abu:Abu_0679 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferases group 1; PFAM: Glycosyl transferases group 1.
 
  
 0.872
ADR23452.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: phe:Phep_3919 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Possible capsular polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.828
ADR22654.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: dfe:Dfer_2955 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative dihydroflavonol-4-reductase; PFAM: NAD dependent epimerase/dehydratase family.
  
  
 0.815
ADR22636.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bth:BT_1344 putative glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
  
 0.619
ADR20582.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gwc:GWCH70_3258 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Capsular polysaccharide biosynthesis glycosyltransferase capM; PFAM: Glycosyl transferases group 1.
 
  
 0.607
ADR20596.1
Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: bfr:BF2582 capsular polysaccharide transporter; PFAM: polysaccharide biosynthesis protein; SPTR: Capsular polysaccharide repeat unit transporter; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.603
ADR20099.1
COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR000106: IPR017867; KEGG: lil:LB035 low molecular weight phosphotyrosine protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Phosphotyrosine protein phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
  
 
 0.567
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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