STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22656.1Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715; KEGG: chu:CHU_3844 polysaccharide export periplasmic protein; PFAM: polysaccharide export protein; SPTR: Periplasmic protein involved in polysaccharide export; manually curated; PFAM: Polysaccharide biosynthesis/export protein. (266 aa)    
Predicted Functional Partners:
ADR22655.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: sli:Slin_6307 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Chain length determinant protein; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
 
 0.995
ADR20605.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: chu:CHU_0880 tyrosine-protein kinase; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Tyrosine-protein kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
 
 0.965
ADR20606.1
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR019554; KEGG: gfo:GFO_1984 polysaccharide export protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 
0.917
ADR22654.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: dfe:Dfer_2955 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative dihydroflavonol-4-reductase; PFAM: NAD dependent epimerase/dehydratase family.
  
  
 0.802
ADR22657.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: abu:Abu_0679 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferases group 1; PFAM: Glycosyl transferases group 1.
 
  
 0.781
ADR22392.1
KEGG: chu:CHU_0064 hypothetical protein; SPTR: Membrane protein, putative.
  
     0.755
ADR23558.1
KEGG: chu:CHU_2695 hypothetical protein; SPTR: Membrane protein, putative.
  
     0.744
ADR22484.1
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412: IPR013525: IPR013526; KEGG: cts:Ctha_2520 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter.
  
  
 0.680
ADR22194.1
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: syp:SYNPCC7002_A0418 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter.
  
  
 0.679
ADR21765.1
KEGG: chu:CHU_3409 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.650
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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