STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22667.1KEGG: lbf:LBF_0345 hypothetical protein; SPTR: Putative uncharacterized protein. (517 aa)    
Predicted Functional Partners:
ADR22666.1
NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086: IPR020476: IPR020084; KEGG: cpi:Cpin_0602 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.
     
 0.651
ADR22668.1
Protein of unknown function DUF413; COGs: COG3085 conserved hypothetical protein; InterPro IPR007335; KEGG: xbo:XBJ1_4197 putative transcriptional regulator with PssR; PFAM: protein of unknown function DUF413; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF.
       0.594
cobB
Silent information regulator protein Sir2; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: sli:Slin_2032 silent information regulator protein Sir2; PFAM: Silent information regulator protein Sir2; SPTR: Silent information regulator protein Sir2; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.511
ADR22665.1
NUDIX hydrolase; InterPro IPR000086; KEGG: cpi:Cpin_0606 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain.
     
 0.467
ADR22664.1
COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR016471: IPR015977; KEGG: cpi:Cpin_0607 putative nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; PRIAM: Nicotinamide phosphoribosyltransferase; SPTR: Nicotinamide phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; Belongs to the NAPRTase family.
     
 0.463
ADR20233.1
Protein of unknown function DUF179; COGs: COG1678 Putative transcriptional regulator protein; InterPro IPR003774; KEGG: dfe:Dfer_4074 protein of unknown function DUF179; PFAM: protein of unknown function DUF179; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1678; Belongs to the UPF0301 (AlgH) family.
   
    0.432
ADR22661.1
Hypothetical protein; COGs: COG0061 sugar kinase; KEGG: fps:FP1085 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: ATP-NAD kinase.
     
 0.431
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.409
ADR22662.1
KEGG: fps:FP1084 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SPFH domain / Band 7 family.
  
    0.406
ADR22669.1
AAA ATPase; KEGG: cpi:Cpin_1073 AAA ATPase; SPTR: AAA ATPase; PFAM: ATPase family associated with various cellular activities (AAA).
       0.404
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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