STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22717.1Hypothetical protein; KEGG: ppd:Ppro_0588 NADH dehydrogenase (quinone); SPTR: Putative uncharacterized protein. (84 aa)    
Predicted Functional Partners:
ADR22718.1
COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: lbf:LBF_2856 cytochrome c oxidase subunit III; PFAM: cytochrome c oxidase subunit III; SPTR: Putative additional subunit of nitric oxide reductase (Nor) complex, membrane protein; PFAM: Cytochrome c oxidase subunit III.
       0.448
ADR22719.1
Putative PAS/PAC sensor protein; COGs: COG2461 conserved hypothetical protein; InterPro IPR000014; KEGG: coc:Coch_0661 putative PAS/PAC sensor protein; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; TIGRFAM: PAS domain S-box.
       0.448
ADR22720.1
Von Willebrand factor type A; COGs: COG4548 Nitric oxide reductase activation protein; InterPro IPR002035; KEGG: lbf:LBF_2852 nitric oxide reductase activation protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: NorD protein; PFAM: von Willebrand factor type A domain.
       0.448
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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