STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22779.1COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: phe:Phep_1630 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel. (296 aa)    
Predicted Functional Partners:
ADR23726.1
COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: aas:Aasi_0641 hypothetical protein; PFAM: MscS Mechanosensitive ion channel; SPTR: Putative uncharacterized protein; PFAM: Mechanosensitive ion channel.
  
     0.602
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.568
ADR20184.1
COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685: IPR010916; KEGG: tdn:Suden_0108 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel.
 
  
 0.539
ADR23532.1
COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_03500 small-conductance mechanosensitive channel; PFAM: MscS Mechanosensitive ion channel; SPTR: Small-conductance mechanosensitive channel; PFAM: Mechanosensitive ion channel.
 
  
 0.516
gcvP
Glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.497
ADR20535.1
COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: hoh:Hoch_3168 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: Putative mechanosensitive channel protein (MscS family); PFAM: Mechanosensitive ion channel.
 
  
 0.483
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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