STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22782.1KEGG: rmr:Rmar_2561 hypothetical protein; SPTR: Outer membrane lipoprotein, putative. (419 aa)    
Predicted Functional Partners:
ADR22781.1
TonB-dependent receptor; InterPro IPR012910: IPR000531; KEGG: rmr:Rmar_2560 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Outer membrane protein, putative; PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor.
     0.886
ADR20971.1
Outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: sli:Slin_1307 outer membrane assembly lipoprotein YfiO; SPTR: Outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO.
  
 
 0.603
ADR20333.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440: IPR019734: IPR006597: IPR013026; KEGG: chu:CHU_1538 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
  
 
 0.571
ADR22116.1
KEGG: cpi:Cpin_0142 hypothetical protein; SPTR: Lipoprotein, putative.
   
 
 0.537
ADR22530.1
Hypothetical protein; KEGG: chu:CHU_0166 outer membrane protein; SPTR: Outer membrane protein, OMP85 family, putative.
 
 
 0.518
ADR23234.1
KEGG: sli:Slin_5311 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.498
ADR23644.1
KEGG: mmr:Mmar10_1145 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.497
ADR21889.1
Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: phe:Phep_1271 patatin; PFAM: Patatin; SPTR: Patatin; PFAM: Patatin-like phospholipase.
  
 
 0.473
ADR21162.1
Surface antigen variable number repeat-containing protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827; KEGG: chu:CHU_2430 outer membrane protein; PFAM: surface antigen variable number repeat-containing protein; SPTR: Surface antigen variable number repeat domain protein; manually curated; PFAM: Surface antigen variable number repeat; Surface antigen.
  
 
 0.450
ADR21548.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184; KEGG: chu:CHU_1917 outer membrane protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Surface antigen variable number repeat; Surface antigen.
  
 
 0.450
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.