STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22791.1KEGG: sli:Slin_5833 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2847). (113 aa)    
Predicted Functional Partners:
ADR22792.1
KEGG: tgo:TGME49_051460 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.757
ADR20915.1
InterPro IPR009474; KEGG: dfe:Dfer_5785 protein of unknown function DUF1094; PFAM: protein of unknown function DUF1094; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1094); Belongs to the UPF0403 family.
  
  
 0.731
ADR22766.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG0492 Thioredoxin reductase; InterPro IPR003953: IPR000103: IPR013027; KEGG: cpi:Cpin_6573 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: HI0933-like protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.655
bshC
Protein of unknown function UCP012535; COGs: COG4365 conserved hypothetical protein; InterPro IPR011199; KEGG: sli:Slin_5360 protein of unknown function UCP012535; PFAM: protein of unknown function UCP012535; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2317); Belongs to the BshC family.
  
  
 0.638
ADR22793.1
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017: IPR005475: IPR005476; KEGG: chu:CHU_3183 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion; PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain-containing protein; PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); SPTR: 2-oxoisovalerate dehydrogenase beta subunit; PFAM: Dehydrogenase E1 component; Tr [...]
   
   0.621
ADR23285.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0012 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
 
   
 0.533
ADR20228.1
COGs: COG0492 Thioredoxin reductase; InterPro IPR000103: IPR013027: IPR005982; KEGG: dfe:Dfer_0086 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.
  
 
 0.499
ADR21284.1
COGs: COG0492 Thioredoxin reductase; InterPro IPR013027: IPR000103; KEGG: sli:Slin_3270 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Probable thioredoxin resuctase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.499
ADR20751.1
KEGG: fjo:Fjoh_2807 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain.
  
   
 0.495
ADR20229.1
LmbE family protein; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737: IPR000276; KEGG: nve:NEMVE_v1g224788 hypothetical protein; PFAM: LmbE family protein; SPTR: GlcNAc-PI de-N-acetylase family protein; PFAM: GlcNAc-PI de-N-acetylase.
  
   
 0.450
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.