STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22802.1Sodium:neurotransmitter symporter; COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: amt:Amet_0580 sodium:neurotransmitter symporter; PFAM: sodium:neurotransmitter symporter; SPTR: Transporter; PFAM: Sodium:neurotransmitter symporter family. (500 aa)    
Predicted Functional Partners:
ADR22803.1
Hypothetical protein.
       0.773
ADR20053.1
Amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: pha:PSHAa1898 Na(+)-linked D-alanine glycine permease; PFAM: sodium:alanine symporter; SPTR: Na(+)-linked D-alanine glycine permease; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein.
 
  
 0.478
ADR22800.1
KEGG: zpr:ZPR_3092 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.465
ADR22801.1
KEGG: cth:Cthe_2161 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.465
ADR22799.1
Arginase/agmatinase/formiminoglutamase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035; KEGG: chu:CHU_3062 formiminoglutamase-related protein; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: Formiminoglutamase-related protein; PFAM: Arginase family; Belongs to the arginase family.
  
    0.432
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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