STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22831.1KEGG: dfe:Dfer_4120 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF349). (416 aa)    
Predicted Functional Partners:
ADR23222.1
KEGG: sli:Slin_0230 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.723
ADR21450.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.700
ADR23069.1
KEGG: chu:CHU_2520 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.697
ADR21824.1
KEGG: sli:Slin_1736 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.695
ADR23666.1
Hypothetical protein; KEGG: sli:Slin_5677 electron transport protein SCO1/SenC; SPTR: Putative uncharacterized protein.
  
     0.695
ADR21901.1
KEGG: sli:Slin_6329 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.686
ADR20408.1
KEGG: dfe:Dfer_3845 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.679
ADR22943.1
KEGG: sli:Slin_5074 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.674
ADR22029.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018062: IPR018060: IPR000005; KEGG: chu:CHU_3826 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
     0.667
ADR20780.1
KEGG: dfe:Dfer_1244 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3098).
  
     0.661
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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