STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22837.1Hypothetical protein; InterPro IPR018247; KEGG: chu:CHU_2528 hypothetical protein; SPTR: CHU large protein; uncharacterized. (2537 aa)    
Predicted Functional Partners:
ADR21670.1
KEGG: mbt:JTY_1909 putative transmembrane protein; SPTR: POSSIBLE TRANSMEMBRANE PROTEIN.
  
   
 0.775
ADR22838.1
Hypothetical protein; KEGG: pjd:Pjdr2_5843 nuclear export factor GLE1; SPTR: Lipoprotein, putative.
       0.773
ADR20183.1
KEGG: tdn:Suden_0109 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
ADR20814.1
KEGG: chu:CHU_3341 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.760
ADR21347.1
Hypothetical protein; KEGG: sea:SeAg_B2454 ShdA; SPTR: Putative uncharacterized protein.
  
   0.758
ADR22205.1
KEGG: mgm:Mmc1_3089 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.732
ADR22836.1
KEGG: phe:Phep_3878 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.723
ADR21597.1
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358: IPR001638: IPR003661: IPR003594: IPR 005467; KEGG: cts:Ctha_0870 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; histidine kinase A domain protein; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extrace [...]
  
   
 0.712
ADR23423.1
Cadherin; InterPro IPR002126; KEGG: mmr:Mmar10_2493 serralysin; SMART: Cadherin; SPTR: Serralysin.
 
   0.679
ADR21882.1
COGs: COG2356 Endonuclease I; InterPro IPR007346: IPR004365; KEGG: oih:OB2858 extracellular ribonuclease; PFAM: Endonuclease I; nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Extracellular ribonuclease; PFAM: Endonuclease I.
  
     0.676
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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