STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22858.1KEGG: chu:CHU_3779 hypothetical protein; SPTR: Putative uncharacterized protein. (261 aa)    
Predicted Functional Partners:
ADR22857.1
KEGG: gau:GAU_3807 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
       0.727
ADR22856.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: gau:GAU_3808 putative outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
       0.676
ADR22859.1
Phosphoesterase PA-phosphatase related protein; InterPro IPR000326; KEGG: gfo:GFO_1033 vanadium-dependent haloperoxidase family protein; PFAM: phosphoesterase PA-phosphatase related; SPTR: Vanadium-dependent haloperoxidase family protein; PFAM: PAP2 superfamily.
       0.405
ADR22860.1
ASPIC/UnbV domain protein; InterPro IPR013517: IPR011519; KEGG: dfe:Dfer_4948 ASPIC/UnbV domain protein; PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; SPTR: ASPIC/UnbV domain protein; PFAM: ASPIC and UnbV; FG-GAP repeat.
       0.405
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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