STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22893.1KEGG: zpr:ZPR_1190 hypothetical protein; SPTR: Putative uncharacterized protein. (266 aa)    
Predicted Functional Partners:
ADR21582.1
KEGG: gfo:GFO_1814 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.718
ADR23336.1
KEGG: gfo:GFO_3620 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.718
ADR23567.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: zpr:ZPR_4195 nitrite reductase (NAD(P)H) large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: NADH oxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
     0.691
ADR23568.1
Hypothetical protein; COGs: COG0348 Polyferredoxin; InterPro IPR017896: IPR017900; KEGG: zpr:ZPR_4197 iron-sulfur binding transmembrane protein; SPTR: 4Fe-4S binding domain protein.
  
     0.688
ADR23133.1
Fatty acid hydroxylase; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: zpr:ZPR_1793 probable transmembrane protein; PFAM: fatty acid hydroxylase; SPTR: Probable transmembrane protein; PFAM: Fatty acid hydroxylase superfamily.
  
     0.643
ADR21485.1
KEGG: gfo:GFO_3614 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.621
ADR22800.1
KEGG: zpr:ZPR_3092 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.572
ADR22892.1
Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR011659: IPR006680: IPR001252; KEGG: rbi:RB2501_11502 hypothetical protein; PFAM: amidohydrolase; WD40-like beta Propeller containing protein; SPTR: WD40-like repeat/amidohydrolase domain protein; PFAM: WD40-like Beta Propeller Repeat; Amidohydrolase family.
       0.513
ADR22891.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: zpr:ZPR_2068 membrane protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
  
     0.510
ADR22297.1
COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR000014: IPR005467: IPR000700: IPR004358: IPR 003018: IPR013655: IPR013656: IPR013767: IPR003661: IPR003594:I PR001610: IPR018247; KEGG: mac:MA1270 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containi [...]
  
     0.494
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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