STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22910.1COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: cat:CA2559_01875 D-alanyl-D-alanine carboxypeptidase; PFAM: beta-lactamase; SPTR: D-alanyl-D-alanine carboxypeptidase; PFAM: Beta-lactamase. (343 aa)    
Predicted Functional Partners:
ADR22911.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347; KEGG: amr:AM1_3557 oxidoreductase, short chain dehydrogenase/reductase family protein; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short chain dehydrogenase/reductase family protein; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.559
ADR21296.1
Transcriptional regulator, AraC family; COGs: COG5616 integral membrane protein; InterProIPR018060: IPR019734: IPR013026: IPR001440: IPR 000005; KEGG: rlg:Rleg_3418 adenylate/guanylate cyclase with TPR repeats; PFAM: helix-turn-helix- domain containing protein AraC type; Tetratricopeptide TPR_1 repeat-containing protein; PRIAM: Adenylate cyclase; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Serine/threonine protein kinase; PFAM: Tetratricopeptide repeat.
 
     0.556
ADR22909.1
KEGG: rbi:RB2501_12192 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.529
ADR21291.1
Transcriptional regulator, AraC family; COGs: COG5616 integral membrane protein; InterProIPR018060: IPR013026: IPR000005: IPR020449: IPR 018062: IPR005829: IPR019734; KEGG: rbi:RB2501_05325 serine/threonine kinase; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Probable serine/threonine kinase; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
     0.486
ADR21936.1
InterPro IPR000494; KEGG: zpr:ZPR_1515 leucine-rich protein; PFAM: epidermal growth-factor receptor (EGFR) L domain; SPTR: Putative uncharacterized protein; PFAM: Receptor L domain.
  
     0.460
ADR21078.1
KEGG: rbi:RB2501_00566 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.449
ADR21293.1
KEGG: rbi:RB2501_05335 acyltransferase family protein; SPTR: Putative uncharacterized protein; PFAM: Acyltransferase family.
  
     0.437
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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