STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22912.1KEGG: cpi:Cpin_6603 hypothetical protein; SPTR: Putative uncharacterized protein. (349 aa)    
Predicted Functional Partners:
ADR21369.1
KEGG: cpi:Cpin_5460 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.621
ADR21401.1
Leucine-rich repeat-containing protein; InterPro IPR001611; KEGG: osa:4327633 hypothetical protein; PFAM: leucine-rich repeat-containing protein; SPTR: Disease resistance protein; PFAM: Leucine Rich Repeat.
  
     0.556
ADR21657.1
Protein of unknown function, Porph ging; InterPro IPR019115; KEGG: cat:CA2559_10573 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200.
  
     0.544
ADR22473.1
KEGG: fjo:Fjoh_4762 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: LETM1-like protein.
  
     0.530
ADR22911.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347; KEGG: amr:AM1_3557 oxidoreductase, short chain dehydrogenase/reductase family protein; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short chain dehydrogenase/reductase family protein; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.504
ADR21366.1
KEGG: cat:CA2559_06060 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.495
ADR23123.1
Putative membrane protein; InterPro IPR007730: IPR019861; KEGG: gfo:GFO_0053 hypothetical protein; PFAM: Sporulation domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); Sporulation related domain; TIGRFAM: Bacteroidetes-specific putative membrane protein.
 
     0.457
ADR23637.1
KEGG: zpr:ZPR_2428 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.450
ADR22913.1
KEGG: mxa:MXAN_0186 putative lipoprotein; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF885).
       0.428
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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