STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22927.1COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: sli:Slin_1598 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Sodium/iodide co-transporter; PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (484 aa)    
Predicted Functional Partners:
ADR23329.1
COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: gfo:GFO_2399 secreted protein containing DUF1343; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Secreted protein containing DUF1343; PFAM: Protein of unknown function (DUF1343).
     0.894
ADR22926.1
KEGG: syp:SYNPCC7002_A1818 CopG family transcriptional regulator; SPTR: Predicted transcriptional regulator, copG family; PFAM: Ribbon-helix-helix protein, copG family.
  
  
 0.736
ADR20149.1
SSS sodium solute transporter superfamily; COGs: COG4146 symporter; InterPro IPR001734: IPR019900; KEGG: rmr:Rmar_2388 SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.718
ADR22925.1
KEGG: lbf:LBF_2813 PIN domain-containing protein; SPTR: Putative PIN domain protein; PFAM: PIN domain.
       0.648
ADR22928.1
InterPro IPR003769; KEGG: chu:CHU_1046 hypothetical protein; PFAM: ATP-dependent Clp protease adaptor protein ClpS; SPTR: Putative uncharacterized protein; PFAM: ATP-dependent Clp protease adaptor protein ClpS.
 
     0.638
ADR23059.1
KEGG: phe:Phep_3738 N-acetylglucosamine kinase; SPTR: N-acetylglucosamine kinase.
 
     0.625
ADR21247.1
Proline dehydrogenase; InterPro IPR002872; KEGG: dfe:Dfer_4393 proline dehydrogenase; PFAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; PFAM: Proline dehydrogenase.
  
  
 0.597
ADR22025.1
Hypothetical protein; COGs: COG2971 N-acetylglucosamine kinase; KEGG: dfe:Dfer_3564 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: BadF/BadG/BcrA/BcrD ATPase family.
 
     0.581
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.549
ADR22352.1
COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: tmt:Tmath_1896 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: Carbon starvation-induced protein; PFAM: Carbon starvation protein CstA.
  
    0.522
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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