STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22946.1COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991: IPR000131: IPR018107; KEGG: cat:CA2559_11013 proton/glutamate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: Proton/glutamate symporter; PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (483 aa)    
Predicted Functional Partners:
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.784
ADR22947.1
Scaffold protein Nfu/NifU; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR014824: IPR001075; KEGG: dfe:Dfer_4882 nitrogen-fixing NifU domain protein; PFAM: Scaffold protein Nfu/NifU; nitrogen-fixing NifU domain protein; SPTR: NifU domain protein; PFAM: Scaffold protein Nfu/NifU N terminal; NifU-like domain.
  
    0.710
ADR22944.1
KEGG: dfe:Dfer_4063 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.709
ADR22352.1
COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: tmt:Tmath_1896 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: Carbon starvation-induced protein; PFAM: Carbon starvation protein CstA.
 
  
 0.546
ADR22943.1
KEGG: sli:Slin_5074 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.495
ADR22940.1
Zinc/iron permease; InterPro IPR003689; KEGG: chu:CHU_0375 hypothetical protein; PFAM: zinc/iron permease; SPTR: Putative uncharacterized protein; PFAM: ZIP Zinc transporter.
  
 
 0.467
ADR22948.1
Glyoxalase/bleomycin resistance protein/dioxygenase; COGs: COG3565 dioxygenase of extradiol dioxygenase family; InterPro IPR004360; KEGG: cyt:cce_0483 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Similar to dioxygenase of extradiol dioxygenase family; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
       0.438
ADR23309.1
COGs: COG0281 Malic enzyme; InterPro IPR012301: IPR012302: IPR002505: IPR012188; KEGG: chu:CHU_0027 malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; SPTR: NADP-dependent malate dehydrogenase; PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase.
  
  
 0.438
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.