STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22948.1Glyoxalase/bleomycin resistance protein/dioxygenase; COGs: COG3565 dioxygenase of extradiol dioxygenase family; InterPro IPR004360; KEGG: cyt:cce_0483 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Similar to dioxygenase of extradiol dioxygenase family; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (177 aa)    
Predicted Functional Partners:
ADR22949.1
COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: sli:Slin_5703 putative transcriptional regulator; PFAM: AAA-4 family protein; SPTR: Putative transcriptional regulator; PFAM: Divergent AAA domain.
       0.566
ADR22947.1
Scaffold protein Nfu/NifU; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR014824: IPR001075; KEGG: dfe:Dfer_4882 nitrogen-fixing NifU domain protein; PFAM: Scaffold protein Nfu/NifU; nitrogen-fixing NifU domain protein; SPTR: NifU domain protein; PFAM: Scaffold protein Nfu/NifU N terminal; NifU-like domain.
       0.479
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.438
ADR22946.1
COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991: IPR000131: IPR018107; KEGG: cat:CA2559_11013 proton/glutamate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: Proton/glutamate symporter; PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.438
ADR22944.1
KEGG: dfe:Dfer_4063 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.402
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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