STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22959.1Lipoprotein; InterProIPR002909: IPR003961: IPR003368: IPR013517: IPR 005046: IPR011889: IPR013838; KEGG: dfe:Dfer_1906 lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; FG-GAP repeat protein; Polymorphic membrane protein Chlamydia; cell surface receptor IPT/TIG domain protein; SMART: Fibronectin type III domain protein; cell surface receptor IPT/TIG domain protein; SPTR: Transmembrane protein, putative; TIGRFAM: lipoprotein; PFAM: Mycoplasma protein of unknown function, DUF285; FG-GAP repeat; TIGRFAM: bacterial surface protein 26-residue repeat. (2607 aa)    
Predicted Functional Partners:
ADR22958.1
Putative membrane protein; InterPro IPR019861; KEGG: gfo:GFO_1837 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
       0.773
ADR21400.1
Hypothetical protein; KEGG: bba:Bd1712 cell wall surface anchor family protein; SPTR: Cell wall surface anchor family protein.
 
   0.406
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.