STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22984.1COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dfe:Dfer_5120 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2. (320 aa)    
Predicted Functional Partners:
ADR22983.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: phe:Phep_3180 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
 
    0.827
ADR22985.1
KEGG: cpi:Cpin_5774 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6.
       0.786
ADR22986.1
Dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680: IPR004722; KEGG: chu:CHU_1793 dihydroorotase; PFAM: amidohydrolase; SPTR: Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type.
       0.786
ADR22987.1
InterPro IPR011933; KEGG: sli:Slin_1217 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
       0.786
ADR23762.1
InterPro IPR018580; KEGG: bfs:BF4264 hypothetical protein; PFAM: Protein of unknown function, membrane YfhO; SPTR: Putative uncharacterized protein; PFAM: Bacterial membrane protein YfhO.
 
  
 0.568
ADR21454.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: fjo:Fjoh_1037 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.
    0.523
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
  
 0.501
ADR20767.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; COGs: COG1109 Phosphomannomutase; InterProIPR016066: IPR005844: IPR005845: IPR005846: IPR 005841; KEGG: chu:CHU_0998 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; SPTR: Phosphomannomutase, putative; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphogl [...]
 
 
 0.428
ADR22111.1
KEGG: chu:CHU_0307 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723).
  
     0.421
ADR22158.1
Metallophosphoesterase; COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: dfe:Dfer_2991 UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; SPTR: Putative UDP-2,3-diacylglucosamine hydrolase; PFAM: Calcineurin-like phosphoesterase.
  
   
 0.417
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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