STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22985.1KEGG: cpi:Cpin_5774 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6. (174 aa)    
Predicted Functional Partners:
ADR22986.1
Dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680: IPR004722; KEGG: chu:CHU_1793 dihydroorotase; PFAM: amidohydrolase; SPTR: Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type.
       0.799
ADR22987.1
InterPro IPR011933; KEGG: sli:Slin_1217 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
       0.799
ADR22983.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: phe:Phep_3180 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
       0.786
ADR22984.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dfe:Dfer_5120 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2.
       0.786
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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