STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23094.1COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sli:Slin_2351 outer membrane protein-like protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane protein TolC, putative; PFAM: Outer membrane efflux protein. (485 aa)    
Predicted Functional Partners:
ADR23096.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cpi:Cpin_7080 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit, putative; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit.
 
   0.959
ADR23095.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cpi:Cpin_7079 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: ABC-type transport systems, involved in lipoprotein release, permease components; PFAM: Predicted permease.
 
   0.906
ADR21030.1
Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: sli:Slin_1204 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Membrane fusion efflux protein, putative; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.657
ADR23093.1
Hypothetical protein; KEGG: bau:BUAPTUC7_342 ribonuclease E; SPTR: Ribonuclease E.
       0.629
ADR20381.1
COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: rbi:RB2501_14909 hypothetical protein; PFAM: amidohydrolase 2; SPTR: Amidohydrolase 2; PFAM: Amidohydrolase.
  
     0.548
ADR22258.1
Outer membrane efflux protein; COGs: COG1566 Multidrug resistance efflux pump; KEGG: zpr:ZPR_2947 outer membrane efflux protein; SPTR: Putative uncharacterized protein.
  
 
 0.514
ADR23404.1
InterPro IPR003838; KEGG: cpi:Cpin_2464 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative transporter permease protein; PFAM: Predicted permease.
 
 
 0.507
ADR23493.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: bth:BT_0672 drug efflux protein; PFAM: acriflavin resistance protein; SPTR: Putative ABC transport system, membrane protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.497
ADR23402.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sli:Slin_4595 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
 0.470
ADR23399.1
InterPro IPR003838; KEGG: cpi:Cpin_2954 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative FtsX-related transmembrane transport protein; PFAM: Predicted permease.
 
 
 0.462
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.