STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23096.1Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cpi:Cpin_7080 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit, putative; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit. (419 aa)    
Predicted Functional Partners:
ADR23095.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cpi:Cpin_7079 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: ABC-type transport systems, involved in lipoprotein release, permease components; PFAM: Predicted permease.
 
   0.967
ADR23094.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sli:Slin_2351 outer membrane protein-like protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane protein TolC, putative; PFAM: Outer membrane efflux protein.
 
   0.959
ADR21209.1
Heavy metal efflux pump, CzcA family; COGs: COG3696 Putative silver efflux pump; InterPro IPR001036: IPR003423: IPR004763; KEGG: gfo:GFO_1186 AcrB/AcrD/AcrF family heavy metal cation efflux protein; PFAM: acriflavin resistance protein; outer membrane efflux protein; SPTR: Putative transport-related, membrane protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; Outer membrane efflux protein; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.770
ADR20825.1
Heavy metal efflux pump, CzcA family; COGs: COG3696 Putative silver efflux pump; InterPro IPR001036: IPR003423: IPR004763; KEGG: pdi:BDI_0802 putative transport-related, membrane protein; PFAM: acriflavin resistance protein; outer membrane efflux protein; SPTR: Cation efflux system protein CzcA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: Outer membrane efflux protein; AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.739
ADR23633.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: dfe:Dfer_5607 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: ABC transporter efflux protein; PFAM: Predicted permease.
 
   0.664
ADR22954.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sli:Slin_4653 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: ABC transporter efflux protein, putative; PFAM: Predicted permease.
 
   0.652
ADR23093.1
Hypothetical protein; KEGG: bau:BUAPTUC7_342 ribonuclease E; SPTR: Ribonuclease E.
       0.627
ADR23399.1
InterPro IPR003838; KEGG: cpi:Cpin_2954 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative FtsX-related transmembrane transport protein; PFAM: Predicted permease.
 
 
 0.574
ADR23402.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sli:Slin_4595 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
 0.531
ADR23404.1
InterPro IPR003838; KEGG: cpi:Cpin_2464 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative transporter permease protein; PFAM: Predicted permease.
 
 
 0.521
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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