STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tatCSec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. (280 aa)    
Predicted Functional Partners:
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
 0.983
ADR23107.1
COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: dfe:Dfer_3272 DNA polymerase III gamma/tau subunit; SPTR: Putative DNA polymerase III, delta subunit.
  
  
 0.785
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.622
secD
Protein translocase subunit secF;protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
     
 0.475
ADR23106.1
KEGG: coc:Coch_0219 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF481.
       0.461
ADR22678.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; COGs: COG2132 Putative multicopper oxidase; InterProIPR009056: IPR012746: IPR011706: IPR001117: IPR 003088: IPR001287; KEGG: fjo:Fjoh_2418 nitrite reductase, copper-containing; PFAM: cytochrome c class I; multicopper oxidase type 2; multicopper oxidase type 1; PRIAM: Nitrite reductase (NO-forming); SPTR: Probable nitrite reductase; TIGRFAM: nitrite reductase, copper-containing; PFAM: Multicopper oxidase; Cytochrome c; TIGRFAM: nitrite reductase, copper-containing.
    
 
 0.443
ADR22080.1
COGs: COG2132 Putative multicopper oxidase; InterProIPR002355: IPR006311: IPR011707: IPR011706: IPR 017909; KEGG: gfo:GFO_1338 CotA-like multicopper oxidase; PFAM: multicopper oxidase type 3; multicopper oxidase type 2; SPTR: CotA-like multicopper oxidase; PFAM: Multicopper oxidase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
    
 
 0.442
ADR22088.1
COGs: COG2132 Putative multicopper oxidase; InterPro IPR002355: IPR011707: IPR001117: IPR011706; KEGG: gfo:GFO_2942 PcoA-like multicopper oxidase; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; SPTR: PcoA-like multicopper oxidase; PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family.
    
 
 0.442
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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