STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23110.1NUMOD4 domain protein; InterPro IPR010902; KEGG: dfe:Dfer_5063 NUMOD4 domain-containing protein; PFAM: NUMOD4 domain protein; SPTR: NUMOD4 domain-containing protein; PFAM: NUMOD4 motif. (178 aa)    
Predicted Functional Partners:
ADR21586.1
Hypothetical protein; InterPro IPR000209; KEGG: sli:Slin_5896 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.609
ADR23111.1
AAA ATPase central domain protein; COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959: IPR003593; KEGG: cpi:Cpin_0165 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: Putative AAA family ATPase protein; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA).
       0.541
ADR20648.1
KEGG: sli:Slin_5550 hypothetical protein; SPTR: Lipoprotein, putative.
  
     0.464
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.453
ADR21202.1
KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein.
 
     0.429
ADR20440.1
KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein.
 
     0.415
ADR20800.1
KEGG: dfe:Dfer_2677 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.407
ADR23112.1
Protein of unknown function DUF6 transmembrane; COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR000620; KEGG: cat:CA2559_02540 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative transmembrane permease; PFAM: EamA-like transporter family.
       0.405
ADR23113.1
KEGG: gfo:GFO_0525 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.405
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.