STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23145.1Protein of unknown function DUF418; COGs: COG2311 membrane protein; InterPro IPR007349; KEGG: pdi:BDI_3123 putative transmembrane protein; PFAM: protein of unknown function DUF418; SPTR: Putative transport protein; PFAM: Protein of unknown function (DUF1624); Protein of unknown function (DUF418). (418 aa)    
Predicted Functional Partners:
ADR23148.1
KEGG: gur:Gura_4371 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.675
ADR23147.1
Cupin 2 conserved barrel domain protein; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: tmt:Tmath_1401 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Putative uncharacterized protein; PFAM: Cupin domain.
 
    0.613
ADR23146.1
Flavodoxin, putative; InterPro IPR008254; KEGG: rbi:RB2501_01036 flavodoxin, putative; SPTR: Flavodoxin.
       0.535
ADR23144.1
COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395: IPR006311: IPR017909; KEGG: ade:Adeh_3215 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family.
     
 0.518
ADR23150.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR020449: IPR018060; KEGG: cpi:Cpin_3787 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
 
     0.470
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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