STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR23159.1KEGG: cat:CA2559_01615 hypothetical protein; SPTR: Putative uncharacterized protein. (173 aa)    
Predicted Functional Partners:
ADR23158.1
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: nfa:nfa1540 putative two-component system response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Putative two-component system response regulator; PFAM: Response regulator receiver domain.
       0.773
ADR22096.1
KEGG: zpr:ZPR_4261 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.549
ADR23636.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: zpr:ZPR_2427 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor plug; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.542
ADR20296.1
O-methyltransferase-like protein; COGs: COG4122 O-methyltransferase; KEGG: dfe:Dfer_0196 O-methyltransferase-like protein; SPTR: Putative uncharacterized protein; PFAM: O-methyltransferase.
  
     0.521
ADR23410.1
EppA_BapA family protein; InterPro IPR009894; KEGG: chu:CHU_1567 hypothetical protein; PFAM: EppA_BapA family protein; SPTR: Putative uncharacterized protein.
  
     0.485
ADR23694.1
InterPro IPR014284; KEGG: fjo:Fjoh_1275 ECF subfamily RNA polymerase sigma-24 factor; SPTR: ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
  
     0.485
ADR20610.1
KEGG: cpi:Cpin_1193 protein of unknown function DUF540; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF540).
  
     0.446
ADR22331.1
KEGG: cat:CA2559_04900 putative biopolymer transport protein; SPTR: Putative uncharacterized protein; PFAM: MotA/TolQ/ExbB proton channel family.
  
     0.440
ADR23157.1
InterPro IPR011727; KEGG: cpi:Cpin_6784 hypothetical protein; PFAM: Conserved hypothetical protein CHP02117; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2459); TIGRFAM: conserved hypothetical protein.
       0.415
ADR21845.1
COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: chu:CHU_0192 peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Putative exported isomerase; PFAM: PPIC-type PPIASE domain.
  
     0.402
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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